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Abstract In the last several years, there has been a surge in the development of machine learning potential (MLP) models for describing molecular systems. We are interested in a particular area of this field — the training of system‐specific MLPs for reactive systems — with the goal of using these MLPs to accelerate free energy simulations of chemical and enzyme reactions. To help new members in our labs become familiar with the basic techniques, we have put together a self‐guided Colab tutorial (https://cc-ats.github.io/mlp_tutorial/), which we expect to be also useful to other young researchers in the community. Our tutorial begins with the introduction of simple feedforward neural network (FNN) and kernel‐based (using Gaussian process regression, GPR) models by fitting the two‐dimensional Müller‐Brown potential. Subsequently, two simple descriptors are presented for extracting features of molecular systems: symmetry functions (including the ANI variant) and embedding neural networks (such as DeepPot‐SE). Lastly, these features will be fed into FNN and GPR models to reproduce the energies and forces for the molecular configurations in a Claisen rearrangement reaction. 

Programmable manipulation of inorganic–organic interfacial electronic properties of ligand-functionalized plasmonic nanoparticles (NPs) is the key parameter dictating their applications such as catalysis, photovoltaics, and biosensing. Here we report the localized surface plasmon resonance (LSPR) properties of gold triangular nanoprisms (Au TNPs) in solid state that are functionalized with dipolar, conjugated ligands. A library of thiocinnamate ligands with varying surface dipole moments were used to functionalize TNPs, which results in ∼150 nm reversible tunability of LSPR peak wavelength with significant peak broadening (∼230 meV). The highly adjustable chemical system of thiocinnamate ligands is capable of shifting the Au work function down to 2.4 eV versus vacuum, i.e., ∼2.9 eV lower than a clean Au (111) surface, and this work function can be modulated up to 3.3 eV, the largest value reported to date through the formation of organothiolate SAMs on Au. Interestingly, the magnitude of plasmonic responses and work function modulation is NP shape dependent. By combining first-principles calculations and experiments, we have established the mechanism of direct wave function delocalization of electrons residing near the Fermi level into hybrid electronic states that are mostly dictated by the inorganic–organic interfacial dipole moments. We determine that both interfacial dipole and hybrid electronic states, and vinyl conjugation together are the key to achieving such extraordinary changes in the optoelectronic properties of ligand-functionalized, plasmonic NPs. The present study provides a quantitative relationship describing how specifically constructed organic ligands can be used to control the interfacial properties of NPs and thus the plasmonic and electronic responses of these functional plasmonics for a wide range of plasmon-driven applications. 

Abstract Plasmonic rulers (PRs) linking nanoscale distance dependence spectral shifts are important for studying cellular microenvironments and biomarker detection. The traditional PR design employs tethering metal nanoparticle pairs using synthetic and biopolymers that severely suffer from reproducibility issues, as well as lack reversibility. Here, the fabrication of novel PRs is reported through the formation of self‐assembled monolayers (SAMs) of photoswitchable molecular machines chemically tethered onto sharp‐tip gold nanostructures (Au NSs). This unique and highly sensitive PR utilizes localized surface plasmon resonance (LSPR) properties of Au NSs to spectroscopically evaluate dipole–dipole coupling between NSs and photoisomerizable spiropyran (SP)‐merocyanine (MC) conjugates in the solid‐state. It is observed that the SAM‐modified NSs are extremely sensitive to the photoisomerization of SP‐to‐MC, resulting in LSPR shifts as large as 5.6 nm for every 1.0 Å change in distance. The highly dipolar MC changes the NS‐SAM interfacial polarizability and alters the dipole–dipole coupling leading to the ultrasensitive PR is hypothesized. The hypothesis is supported theoretically by calculating dipole polarizability of an inorganic‐organic heterodimer model and experimentally by determining work function and interfacial dipole values. Taken together, this work represents the fabrication of next‐generation PRs, which hold great promise for advanced, plasmonic‐based sensors and optoelectronic device fabrication.